public class XmlVaspReader extends XmlReader
Modifier and Type | Class and Description |
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(package private) class |
XmlVaspReader.VaspHandler |
XmlReader.DummyResolver, XmlReader.JmolXmlHandler
Modifier and Type | Field and Description |
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(package private) float |
a |
(package private) float |
alpha |
(package private) int |
atomCount |
(package private) java.lang.String |
atomName |
(package private) java.lang.String[] |
atomNames |
(package private) java.lang.String |
atomSym |
(package private) java.lang.String[] |
atomSyms |
(package private) float |
b |
(package private) float |
beta |
(package private) float |
c |
(package private) java.lang.StringBuffer |
data |
(package private) float |
gamma |
(package private) boolean |
haveUnitCell |
(package private) int |
iAtom |
(package private) boolean |
modelRead |
(package private) java.lang.String |
name |
(package private) boolean |
readThisModel |
(package private) java.lang.String[] |
vaspImplementedAttributes |
atom, chars, implementedAttributes, keepChars, parent
addVibrations, ANGSTROMS_PER_BOHR, applySymmetryToBonds, atomSetCollection, bsFilter, bsModels, calculationType, continuing, desiredModelNumber, desiredVibrationNumber, doApplySymmetry, doCheckUnitCell, doProcessLines, filter, getHeader, haveModel, havePartialChargeFilter, htParams, ignoreFileSpaceGroupName, ignoreFileSymmetryOperators, ignoreFileUnitCell, iHaveSymmetryOperators, iHaveUnitCell, isSequential, isTrajectory, latticeCells, line, matUnitCellOrientation, modelNumber, next, notionalUnitCell, os, prevline, ptLine, reader, readerName, readMolecularOrbitals, spaceGroup, symmetry, templateAtomCount, vibrationNumber, viewer
Constructor and Description |
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XmlVaspReader() |
Modifier and Type | Method and Description |
---|---|
void |
processEndElement(java.lang.String uri,
java.lang.String localName,
java.lang.String qName) |
void |
processStartElement(java.lang.String namespaceURI,
java.lang.String localName,
java.lang.String qName,
java.util.HashMap atts) |
protected void |
processXml(XmlReader parent,
AtomSetCollection atomSetCollection,
java.io.BufferedReader reader,
JSObject DOMNode) |
protected void |
processXml(XmlReader parent,
AtomSetCollection atomSetCollection,
java.io.BufferedReader reader,
org.xml.sax.XMLReader xmlReader) |
initializeReader, parseReaderXML, readAtomSetCollectionFromDOM, setKeepChars
addJmolScript, addPrimitiveLatticeVector, addSites, addSiteScript, applySymmetryAndSetTrajectory, checkFilter, checkLastModel, checkLine, checkLineForScript, checkLineForScript, clearLatticeParameters, cloneLastAtomSet, discardLines, discardLinesUntilBlank, discardLinesUntilContains, discardLinesUntilContains, discardLinesUntilNonBlank, discardLinesUntilStartsWith, doGetModel, doGetVibration, fillDataBlock, fillDataBlock, fillFloatArray, fillFrequencyData, filterAtom, finalizeReader, getElementSymbol, getFortranFormatLengths, getStrings, getSymmetry, getTokens, getTokens, getTokens, getTokensFloat, initializeSymmetry, isLastModel, newAtomSet, parseFloat, parseFloat, parseFloat, parseInt, parseInt, parseInt, parseInt, parseStringInfestedFloatArray, parseToken, parseToken, parseToken, parseTokenNext, parseTrimmed, parseTrimmed, readData, readLine, set2D, setAtomCoord, setAtomCoord, setFilter, setFractionalCoordinates, setMOData, setSpaceGroupName, setSymmetryOperator, setTransform, setUnitCell, setUnitCellItem
java.lang.String[] vaspImplementedAttributes
java.lang.StringBuffer data
java.lang.String name
int atomCount
int iAtom
boolean modelRead
boolean readThisModel
boolean haveUnitCell
java.lang.String[] atomNames
java.lang.String[] atomSyms
java.lang.String atomName
java.lang.String atomSym
float a
float b
float c
float alpha
float beta
float gamma
protected void processXml(XmlReader parent, AtomSetCollection atomSetCollection, java.io.BufferedReader reader, org.xml.sax.XMLReader xmlReader)
processXml
in class XmlReader
protected void processXml(XmlReader parent, AtomSetCollection atomSetCollection, java.io.BufferedReader reader, JSObject DOMNode)
processXml
in class XmlReader
public void processStartElement(java.lang.String namespaceURI, java.lang.String localName, java.lang.String qName, java.util.HashMap atts)
processStartElement
in class XmlReader
public void processEndElement(java.lang.String uri, java.lang.String localName, java.lang.String qName)
processEndElement
in class XmlReader