private class AminoPolymer.Bridge
extends java.lang.Object
Modifier and Type | Field and Description |
---|---|
protected Atom |
a |
protected Atom |
b |
protected boolean |
isAntiparallel |
protected int[][] |
ladder |
Modifier | Constructor and Description |
---|---|
protected |
AminoPolymer.Bridge(Atom a,
Atom b,
java.util.Map htLadders) |
Modifier and Type | Method and Description |
---|---|
protected boolean |
addBridge(AminoPolymer.Bridge bridge,
java.util.Map htLadders) |
private void |
addLadder(java.util.Map htLadders) |
private boolean |
canAdd(AminoPolymer.Bridge bridge) |
private void |
extendLadder(int index1,
int index2) |
java.lang.String |
toString() |
protected Atom a
protected Atom b
protected int[][] ladder
protected boolean isAntiparallel
private void addLadder(java.util.Map htLadders)
public java.lang.String toString()
toString
in class java.lang.Object
protected boolean addBridge(AminoPolymer.Bridge bridge, java.util.Map htLadders)
private boolean canAdd(AminoPolymer.Bridge bridge)
private void extendLadder(int index1, int index2)