saveFeatures {GenomicFeatures}R Documentation

Methods to save and load the database contents for a Transcript Object.

Description

These methods provide a way to dump a TranscriptDb object to an SQLite file, and to recreate that object the saved file.

Usage

  saveFeatures(x, file)
  loadFeatures(file)

Arguments

x

a transcripts object, which contains a connection to a DB.

file

A SQLite Database filename.

Value

For loadFeatures only, a TranscriptDb object is returned.

Author(s)

M. Carlson

See Also

TranscriptDb

Examples

  txdb <- 
    loadFeatures(system.file("extdata", "UCSC_knownGene_sample.sqlite",
                             package = "GenomicFeatures"))
  txdb

[Package GenomicFeatures version 1.6.1 Index]