All Classes

AboutDialog AdfReader AimsReader AlchemyReader AlphaMonomer AlphaPolymer AminoMonomer AminoPolymer AnimationManager ApbsReader AppConsole AppletConsole AppletConsole.GetKey AppletWrapper ArrayListTransferHandler ArrayUtil ASimpleJvxlWriter Atom Atom AtomCollection AtomData AtomDataReader AtomDataServer AtomIndexIterator AtomIteratorWithinModel AtomIteratorWithinSet AtomSetChooser AtomSetChooser.AtomSet AtomSetCollection AtomSetCollectionReader AtomShape AviCreator Awt3D Axes AxesRenderer Backbone BackboneRenderer Balls BallsGenerator BallsRenderer Base64 Bbcage BbcageRenderer BinaryDocument BioPolymer BioShape BioShapeCollection BioShapeRenderer BitSetUtil Bond Bond Bond.BondSet BondCollection BondIterator BondIteratorSelected BoxInfo Bspf Bspt Calculation Calculations CalculationsUFF CarbohydrateMonomer CarbohydratePolymer Cartoon CartoonRenderer CastepReader Chain CifDataReader CifReader Circle3D ClassPreloader Colix3D ColorEncoder ColorManager CommandHistory CompoundDocument ConsoleTextArea CsfReader CubeIterator CubeReader CubeReader Cylinder3D DataManager DCT DefaultLogger Dialog Dialog.TypeFilter Dipole Dipoles DipolesRenderer DisplayPanel Dots DotsRenderer Draw DrawMesh DrawRenderer Echo EchoRenderer EfvetReader Eigen Element Ellipsoids Ellipsoids.Ellipsoid EllipsoidsRenderer EnterListener EnvelopeCalculation Escape Export3D FFParam FFReader FileChooser FileDropper FileManager FilePreview FilePreview.FPPanel FileReader FileTyper FoldingXyzReader Font3D FontLineShape FontLineShapeRenderer ForceField ForceFieldUFF FrameExportJmolAdapter Frank FrankRenderer GamessReader GamessUKReader GamessUSReader GaussianDialog GaussianReader GaussianWfnReader Geodesic GeoSurface GeoSurfaceRenderer GhemicalMMReader GifEncoder GifEncoder.AdaptiveColorCollection GifEncoder.ColorItem GifEncoder.ColorVector GifEncoder.ColorVector.CountComparator GraphCharacteristics GraphControlData Graphics3D GromacsReader Group GT GT.Language GuiMap GuiMap.GetKey HallInfo Halos HalosRenderer HBond Helix HelpDialog Hermite3D HinReader HistoryFile Hover HoverRenderer Huffman ImageCreator ImageEncoder ImageSelection Int2IntHash Int2IntHash.Entry Interface InvalidSmilesException IsoFxyReader IsoFxyzReader IsoMepReader IsoMOReader IsoPlaneReader IsoShapeReader IsoSolventReader Isosurface IsosurfaceGenerator IsosurfaceMesh IsosurfaceRenderer JaguarReader JaguarReader JmeReader Jmol Jmol JmolAdapter JmolApp JmolAppConsoleInterface JmolAppletInterface JmolAppletRegistry JmolBioResolver JmolCallbackListener JmolConsole JmolConstants JmolData JmolDialogInterface JmolFileReaderInterface JmolImageCreatorInterface JmolInstance JmolLineReader JmolMovieCreatorInterface JmolPanel JmolPanel.ActionChangedListener JmolPdfCreatorInterface JmolPopup JmolPopupAwt JmolPopupSwing JmolRendererInterface JmolResourceHandler JmolScriptEditorInterface JmolSelectionListener JmolSimpleViewer JmolStatusListener JmolViewer JpegEncoder JpegInfo Jvm12 Jvxl JvxlData JvxlData JvxlReader JvxlWrite Labels LabelsGenerator LabelsRenderer LabelToken LcaoCartoon LcaoCartoonGenerator LcaoCartoonRenderer Leaf LimitedLineReader LimitedLineReader Line3D Logger LoggerInterface LogPanel LoopedStreams MarchingCubes MarchingSquares MarchingSquares.ContourVertex MarchingSquares.PlanarSquare MdCrdReader MdTopReader Measure Measurement MeasurementPending MeasurementTable Measures MeasuresRenderer MepCalculation MepCalculationInterface Mesh MeshCollection MeshData MeshDataServer MeshRenderer MeshRibbon MeshRibbonRenderer MinAtom MinBond Minimizer MinimizerInterface MOCalculation MOCalculationInterface Model ModelCollection ModelCollection.StateScript ModelCollection.Structure ModelLoader ModelManager ModelSet Mol2Reader MoldenReader MolecularOrbital MolecularOrbitalGenerator MolecularOrbitalRenderer Molecule Molecules MolReader MonitorInputStream MonitorInputStream Monomer MopacData MopacDataReader MopacGraphfReader MopacReader MOReader MouseManager MouseManager10 MouseManager11 MouseManager14 MouseWrapper11 MouseWrapper14 MrcBinaryReader Node Normix3D NucleicMonomer NucleicPolymer NumericDataUtils NWChemReader Object2d Object2dShape ObjReader OdysseyReader OdysseyXMLReader Orbitals Parameters Parser PatternMatcher PdbReader PdfCreator PhosphorusMonomer PhosphorusPolymer PickingManager Platform3D PltFormattedReader Pmesh PmeshGenerator PmeshReader PmeshRenderer PngEncoder Point3fi PointGroup PolygonFileReader Polyhedra PolyhedraRenderer Polymer PopInJmol PopupResourceBundle PovrayDialog PovraySaver PpmEncoder PqrReader PreferencesDialog PropertyManager ProteinStructure PsiReader QchemReader Quadric QuantumCalculation Quaternion RecentFilesDialog RepaintManager Resolver Resolver Rgb16 Ribbons RibbonsRenderer Rockets RocketsRenderer Rotation SaisieDlg ScriptButtons ScriptCompilationTokenParser ScriptCompiler ScriptContext ScriptEditor ScriptEvaluator ScriptFlowContext ScriptFunction ScriptManager ScriptMathProcessor ScriptVariable SelectionManager Shade3D Shape ShapeRenderer Sheet ShelxReader SimpleMarchingCubes SimpleMarchingCubesOld SmarterJmolAdapter SmilesAtom SmilesBond SmilesMatcherInterface SmilesMolecule SmilesParser SpaceGroup SpartanArchive SpartanInputReader SpartanReader SpartanSmolReader Sphere3D Splash SplashInterface Stars StarsRenderer StateManager StateManager.Connection StatusBar StatusManager Sticks SticksGenerator SticksRenderer Strands StrandsRenderer StringDataUtils Structure SurfaceFileReader SurfaceGenerator SurfaceReader Swing3D Symmetry SymmetryInfo SymmetryInterface SymmetryOperation TempArray Test Text Text3D TextFormat TextShape TickerThread Token Trace TraceRenderer TransformManager TransformManager10 TransformManager11 Translation Triangle3D TriangleData TriangleServer Turn Uccage UccageRenderer UnitCell Util V3000Reader Vectors VectorsRenderer VertexDataServer Viewer Visua VolumeData VolumeData VolumeDataInterface VolumeDataReader VolumeFileReader VoxelDataCreator WebExport WebMaker WebMOReader WebPanel WhatsNewDialog Wien2kReader WrappedApplet WrappedAppletLoader XmlArgusReader XmlChem3dReader XmlCmlReader XmlMolproReader XmlOdysseyReader XmlReader XmlReader.DummyResolver XmlXsdReader XplorReader XyzReader ZipUtil ZoneVisu _Exporter _IdtfExporter _MayaExporter _PovrayExporter _VrmlExporter _X3dExporter